High occurrence of jellyfish predation by black-browed and Campbell albatross identified by DNA metabarcoding 2017

Occurrence
Dernière version Publié par Australian Antarctic Data Centre le oct. 2, 2018 Australian Antarctic Data Centre

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Description

This spreadsheet provides the sequences counts for the DNA groups found in the scats of black-browed albatross at New Island and Steeple Jason Island, Falkland Islands; Diego Ramírez and Albatross Islet, Chile; Bird Island, South Georgia; Canyon des Sourcils Noirs, Kerguelen Archipelago, France; Macquarie Island, Australia; and Campbell albatross at Campbell Island, NZ. Scat samples were collected in 2013/14 and 2014/15 at New Island, Steeple Jason Island, Macquarie Island, Campbell Island and Bird Island; in 2013/14 and 2015/16 at Kerguelen; in 2014/15 and 2015/16 at Albatross Islet and in 2013/14 at Diego Ramírez. Samples were collected during Incubation (Oct-Nov), early chick-rearing (Dec-Jan) or late-chick rearing (Feb-Mar). Due to the availability of birds at the colony, samples were predominantly collected from adults during incubation and early chick-rearing and chicks during late chick rearing. Samples sizes were too low during this study to directly compare dietary differences between chicks and adults; however, dietary comparisons between breeding stages were examined for sites where samples were collected during multiple breeding stages. Samples were PCR amplified with a universal metazoan primer set that is highly conserved and amplifies a region of the nuclear small subunit ribosomal DNA gene (18S rDNA). Details of the molecular methods and synthesis of this data can be found in: McInnes, J.C., Alderman, R., Raymond, B., Lea, M-A., Deagle, B., Catry, P., Gras, M., Phillip, R.A., Stanworth, A., Suazo, C., Thompson, D., Weimerskirch, H., Gras. M., and Jarman, S.N. High occurrence of jellyfish predation by black-browed and Campbell albatross identified by DNA metabarcoding. Molecular Ecology.

Enregistrements de données

Les données de cette ressource occurrence ont été publiées sous forme dune Archive Darwin Core (Darwin Core Archive ou DwC-A), le format standard pour partager des données de biodiversité en tant quensemble dun ou plusieurs tableurs de données. Le tableur de données du cœur de standard (core) contient 4 470 enregistrements.

Cet IPT archive les données et sert donc de dépôt de données. Les données et métadonnées de la ressource sont disponibles pour téléchargement dans la section téléchargements. Le tableau des versions liste les autres versions de chaque ressource rendues disponibles de façon publique et permet de tracer les modifications apportées à la ressource au fil du temps.

Versions

Le tableau ci-dessous naffiche que les versions publiées de la ressource accessibles publiquement.

Comment citer

Les chercheurs doivent citer cette ressource comme suit:

McInnes, J.C., Alderman, R., Raymond, B., Lea, M-A., Deagle, B., Catry, P., Gras, M., Phillip, R.A., Stanworth, A., Suazo, C., Thompson, D., Weimerskirch, H., Gras. M., and Jarman, S.N. 2017 High occurrence of jellyfish predation by black-browed and Campbell albatross identified by DNA metabarcoding. Molecular Ecology.

Droits

Les chercheurs doivent respecter la déclaration de droits suivante:

L’éditeur et détenteur des droits de cette ressource est Australian Antarctic Data Centre. Ce travail est sous licence Creative Commons Attribution (CC-BY) 4.0.

Enregistrement GBIF

Cette ressource a été enregistrée sur le portail GBIF, et possède lUUID GBIF suivante : 9a10be01-3d0c-4f6e-9811-0627bd7a210d.  Australian Antarctic Data Centre publie cette ressource, et est enregistré dans le GBIF comme éditeur de données avec lapprobation du Atlas of Living Australia.

Mots-clé

Occurrence

Contacts

Julie McInnes
  • Créateur
  • Personne De Contact
  • Investigator
IMAS-Univeristy of Tasmania
Hobart
TAS
AU
Dave Connell
  • Fournisseur Des Métadonnées
Australia Antarctic Division
  • 203 Channel Highway
7050 Hobart
Tasmania
AU
Rachel Anderman
  • Personne De Contact
  • Investigator
Department of Primary Industries, Parks, water and Environment
Hobart
TAS
AU
Ben Raymond
  • Personne De Contact
  • Investigator
Australia Antarctic Division
  • 203 Channel Highway
7050 Hobart
Tasmania
AU
Mary-anne Lea
  • Personne De Contact
  • Investigator
IMAS-University of Tasmania
Hobart
TAS
AU
Bruce Deagle
  • Personne De Contact
  • Investigator
Australia Antarctic Division
  • 203 Channel Highway
7050 Hobart
Tasmania
AU
Data Officer AADC
  • Distributeur
Australia Antarctic Division
  • 203 Channel Highway
7050 Hobart
Tasmania
AU

Couverture géographique

OCEAN, SOUTHERN OCEAN, ATLANTIC OCEAN, INDIAN OCEAN, DIEGO RAMIREZ, CAMPBELL ISLAND, ALBATROSS ISLET, BIRD ISLAND, POLAR,

Enveloppe géographique Sud Ouest [-59,889, -176,484], Nord Est [-46,757, -66,094]

Couverture taxonomique

Species of invertebrates were identified in fecals samples of Black-Browed Albatross by DNA metabarcoding

Subphylum Tunicata
Class Actinopterygii, Anthozoa, Cephalopoda, Chondrichthyes, Hydrozoa, Scyphozoa
Subclass Crustacea
Genus Ctenophora
Species Thalassarche melanophris (Black-Browed Albatross)

Couverture temporelle

Date de début / Date de fin 2013-12-01 / 2016-01-15

Données sur le projet

This spreadsheet provides the sequences counts for the DNA groups found in the scats of black-browed albatross at New Island and Steeple Jason Island, Falkland Islands; Diego Ramírez and Albatross Islet, Chile; Bird Island, South Georgia; Canyon des Sourcils Noirs, Kerguelen Archipelago, France; Macquarie Island, Australia; and Campbell albatross at Campbell Island, NZ. Scat samples were collected in 2013/14 and 2014/15 at New Island, Steeple Jason Island, Macquarie Island, Campbell Island and Bird Island; in 2013/14 and 2015/16 at Kerguelen; in 2014/15 and 2015/16 at Albatross Islet and in 2013/14 at Diego Ramírez. Samples were collected during Incubation (Oct-Nov), early chick-rearing (Dec-Jan) or late-chick rearing (Feb-Mar). Due to the availability of birds at the colony, samples were predominantly collected from adults during incubation and early chick-rearing and chicks during late chick rearing. Samples sizes were too low during this study to directly compare dietary differences between chicks and adults; however, dietary comparisons between breeding stages were examined for sites where samples were collected during multiple breeding stages. Samples were PCR amplified with a universal metazoan primer set that is highly conserved and amplifies a region of the nuclear small subunit ribosomal DNA gene (18S rDNA). Details of the molecular methods and synthesis of this data can be found in: McInnes, J.C., Alderman, R., Raymond, B., Lea, M-A., Deagle, B., Catry, P., Gras, M., Phillip, R.A., Stanworth, A., Suazo, C., Thompson, D., Weimerskirch, H., Gras. M., and Jarman, S.N. High occurrence of jellyfish predation by black-browed and Campbell albatross identified by DNA metabarcoding. Molecular Ecology.

Titre High occurrence of jellyfish predation by black-browed and Campbell albatross identified by DNA metabarcoding
Identifiant AAS_4014
Financement Australian Antarctic Science Grant, Grant/ Award Number: 4014 and 4112; Winifred Violet Scott Charitable Trust; Falkland Islands Government; FCT—Portugal, Grant/ Award Number: UID/MAR/04292/2013

Les personnes impliquées dans le projet:

Julie McInnes
  • Auteur

Méthodes déchantillonnage

Samples were PCR amplified with a universal metazoan primer set that is highly conserved and amplifies a region of the nuclear small subunit ribosomal DNA gene (18S rDNA). Details of the molecular methods and synthesis of this data can be found in: McInnes, J.C., Alderman, R., Raymond, B., Lea, M-A., Deagle, B., Catry, P., Gras, M., Phillip, R.A., Stanworth, A., Suazo, C., Thompson, D., Weimerskirch, H., Gras. M., and Jarman, S.N. High occurrence of jellyfish predation by black-browed and Campbell albatross identified by DNA metabarcoding. Molecular Ecology.

Etendue de létude Scat samples were collected in 2013/14 and 2014/15 at New Island, Steeple Jason Island, Macquarie Island, Campbell Island and Bird Island; in 2013/14 and 2015/16 at Kerguelen; in 2014/15 and 2015/16 at Albatross Islet and in 2013/14 at Diego Ramírez. Samples were collected during Incubation (Oct-Nov), early chick-rearing (Dec-Jan) or late-chick rearing (Feb-Mar). Due to the availability of birds at the colony, samples were predominantly collected from adults during incubation and early chick-rearing and chicks during late chick rearing. Samples sizes were too low during this study to directly compare dietary differences between chicks and adults; however, dietary comparisons between breeding stages were examined for sites where samples were collected during multiple breeding stages.
Contrôle qualité See the referenced paper for more information. 2018-09-24 - dataset reformatted by Daniela Farias for GBIF/OBIS compliance. The original datasheet was reformatted to fit IPT Biodiversity.AQ standard. The new datasheet "McInnesMolecularEcology.csv" provides the dataset ID, event ID, recordNumber, resourceID, relatedResourceID, relationshipOfResource, relationshipAccordingTo, locationID, decimalLatitude, decimalLongitude, country, countryCode, eventDate, year, verbatimMonth, behaviour, occurrenceStatus, basisOfRecord, organismQuantity, organismQuantityType, protocol. The taxonomical organisation is provided to the lowest taxonomical rank that could be determined, after matched in WoRMS (World Register of Marine Species).

Description des étapes de la méthode:

  1. Scat samples were PCR amplified with a universal metazoan primer set that is highly conserved and amplifies a region of the nuclear small subunit ribosomal DNA gene (18S rDNA)

Métadonnées additionnelles