High occurrence of jellyfish predation by black-browed and Campbell albatross identified by DNA metabarcoding 2017

Событие
Последняя версия опубликовано Australian Antarctic Data Centre окт. 2, 2018 Australian Antarctic Data Centre

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Описание

This spreadsheet provides the sequences counts for the DNA groups found in the scats of black-browed albatross at New Island and Steeple Jason Island, Falkland Islands; Diego Ramírez and Albatross Islet, Chile; Bird Island, South Georgia; Canyon des Sourcils Noirs, Kerguelen Archipelago, France; Macquarie Island, Australia; and Campbell albatross at Campbell Island, NZ. Scat samples were collected in 2013/14 and 2014/15 at New Island, Steeple Jason Island, Macquarie Island, Campbell Island and Bird Island; in 2013/14 and 2015/16 at Kerguelen; in 2014/15 and 2015/16 at Albatross Islet and in 2013/14 at Diego Ramírez. Samples were collected during Incubation (Oct-Nov), early chick-rearing (Dec-Jan) or late-chick rearing (Feb-Mar). Due to the availability of birds at the colony, samples were predominantly collected from adults during incubation and early chick-rearing and chicks during late chick rearing. Samples sizes were too low during this study to directly compare dietary differences between chicks and adults; however, dietary comparisons between breeding stages were examined for sites where samples were collected during multiple breeding stages. Samples were PCR amplified with a universal metazoan primer set that is highly conserved and amplifies a region of the nuclear small subunit ribosomal DNA gene (18S rDNA). Details of the molecular methods and synthesis of this data can be found in: McInnes, J.C., Alderman, R., Raymond, B., Lea, M-A., Deagle, B., Catry, P., Gras, M., Phillip, R.A., Stanworth, A., Suazo, C., Thompson, D., Weimerskirch, H., Gras. M., and Jarman, S.N. High occurrence of jellyfish predation by black-browed and Campbell albatross identified by DNA metabarcoding. Molecular Ecology.

Записи данных

Данные этого occurrence ресурса были опубликованы в виде Darwin Core Archive (DwC-A), который является стандартным форматом для обмена данными о биоразнообразии в виде набора из одной или нескольких таблиц. Основная таблица данных содержит 4 470 записей.

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Версии

В таблице ниже указаны только опубликованные версии ресурса, которые доступны для свободного скачивания.

Как оформить ссылку

Исследователи должны дать ссылку на эту работу следующим образом:

McInnes, J.C., Alderman, R., Raymond, B., Lea, M-A., Deagle, B., Catry, P., Gras, M., Phillip, R.A., Stanworth, A., Suazo, C., Thompson, D., Weimerskirch, H., Gras. M., and Jarman, S.N. 2017 High occurrence of jellyfish predation by black-browed and Campbell albatross identified by DNA metabarcoding. Molecular Ecology.

Права

Исследователи должны соблюдать следующие права:

Публикующей организацией и владельцем прав на данную работу является Australian Antarctic Data Centre. Эта работа находится под лицензией Creative Commons Attribution (CC-BY 4.0).

Регистрация в GBIF

Этот ресурс был зарегистрирован в GBIF, ему был присвоен следующий UUID: 9a10be01-3d0c-4f6e-9811-0627bd7a210d.  Australian Antarctic Data Centre отвечает за публикацию этого ресурса, и зарегистрирован в GBIF как издатель данных при оподдержке Atlas of Living Australia.

Ключевые слова

Occurrence

Контакты

Julie McInnes
  • Originator
  • Point Of Contact
  • Investigator
IMAS-Univeristy of Tasmania
Hobart
TAS
AU
Dave Connell
  • Metadata Provider
Australia Antarctic Division
  • 203 Channel Highway
7050 Hobart
Tasmania
AU
Rachel Anderman
  • Point Of Contact
  • Investigator
Department of Primary Industries, Parks, water and Environment
Hobart
TAS
AU
Ben Raymond
  • Point Of Contact
  • Investigator
Australia Antarctic Division
  • 203 Channel Highway
7050 Hobart
Tasmania
AU
Mary-anne Lea
  • Point Of Contact
  • Investigator
IMAS-University of Tasmania
Hobart
TAS
AU
Bruce Deagle
  • Point Of Contact
  • Investigator
Australia Antarctic Division
  • 203 Channel Highway
7050 Hobart
Tasmania
AU
Data Officer AADC
  • Distributor
Australia Antarctic Division
  • 203 Channel Highway
7050 Hobart
Tasmania
AU

Географический охват

OCEAN, SOUTHERN OCEAN, ATLANTIC OCEAN, INDIAN OCEAN, DIEGO RAMIREZ, CAMPBELL ISLAND, ALBATROSS ISLET, BIRD ISLAND, POLAR,

Ограничивающие координаты Юг Запад [-59,889, -176,484], Север Восток [-46,757, -66,094]

Таксономический охват

Species of invertebrates were identified in fecals samples of Black-Browed Albatross by DNA metabarcoding

Subphylum Tunicata
Class Actinopterygii, Anthozoa, Cephalopoda, Chondrichthyes, Hydrozoa, Scyphozoa
Subclass Crustacea
Genus Ctenophora
Species Thalassarche melanophris (Black-Browed Albatross)

Временной охват

Дата начала / Дата окончания 2013-12-01 / 2016-01-15

Данные проекта

This spreadsheet provides the sequences counts for the DNA groups found in the scats of black-browed albatross at New Island and Steeple Jason Island, Falkland Islands; Diego Ramírez and Albatross Islet, Chile; Bird Island, South Georgia; Canyon des Sourcils Noirs, Kerguelen Archipelago, France; Macquarie Island, Australia; and Campbell albatross at Campbell Island, NZ. Scat samples were collected in 2013/14 and 2014/15 at New Island, Steeple Jason Island, Macquarie Island, Campbell Island and Bird Island; in 2013/14 and 2015/16 at Kerguelen; in 2014/15 and 2015/16 at Albatross Islet and in 2013/14 at Diego Ramírez. Samples were collected during Incubation (Oct-Nov), early chick-rearing (Dec-Jan) or late-chick rearing (Feb-Mar). Due to the availability of birds at the colony, samples were predominantly collected from adults during incubation and early chick-rearing and chicks during late chick rearing. Samples sizes were too low during this study to directly compare dietary differences between chicks and adults; however, dietary comparisons between breeding stages were examined for sites where samples were collected during multiple breeding stages. Samples were PCR amplified with a universal metazoan primer set that is highly conserved and amplifies a region of the nuclear small subunit ribosomal DNA gene (18S rDNA). Details of the molecular methods and synthesis of this data can be found in: McInnes, J.C., Alderman, R., Raymond, B., Lea, M-A., Deagle, B., Catry, P., Gras, M., Phillip, R.A., Stanworth, A., Suazo, C., Thompson, D., Weimerskirch, H., Gras. M., and Jarman, S.N. High occurrence of jellyfish predation by black-browed and Campbell albatross identified by DNA metabarcoding. Molecular Ecology.

Название High occurrence of jellyfish predation by black-browed and Campbell albatross identified by DNA metabarcoding
Идентификатор AAS_4014
Финансирование Australian Antarctic Science Grant, Grant/ Award Number: 4014 and 4112; Winifred Violet Scott Charitable Trust; Falkland Islands Government; FCT—Portugal, Grant/ Award Number: UID/MAR/04292/2013

Исполнители проекта:

Julie McInnes
  • Author

Методы сбора

Samples were PCR amplified with a universal metazoan primer set that is highly conserved and amplifies a region of the nuclear small subunit ribosomal DNA gene (18S rDNA). Details of the molecular methods and synthesis of this data can be found in: McInnes, J.C., Alderman, R., Raymond, B., Lea, M-A., Deagle, B., Catry, P., Gras, M., Phillip, R.A., Stanworth, A., Suazo, C., Thompson, D., Weimerskirch, H., Gras. M., and Jarman, S.N. High occurrence of jellyfish predation by black-browed and Campbell albatross identified by DNA metabarcoding. Molecular Ecology.

Охват исследования Scat samples were collected in 2013/14 and 2014/15 at New Island, Steeple Jason Island, Macquarie Island, Campbell Island and Bird Island; in 2013/14 and 2015/16 at Kerguelen; in 2014/15 and 2015/16 at Albatross Islet and in 2013/14 at Diego Ramírez. Samples were collected during Incubation (Oct-Nov), early chick-rearing (Dec-Jan) or late-chick rearing (Feb-Mar). Due to the availability of birds at the colony, samples were predominantly collected from adults during incubation and early chick-rearing and chicks during late chick rearing. Samples sizes were too low during this study to directly compare dietary differences between chicks and adults; however, dietary comparisons between breeding stages were examined for sites where samples were collected during multiple breeding stages.
Контроль качества See the referenced paper for more information. 2018-09-24 - dataset reformatted by Daniela Farias for GBIF/OBIS compliance. The original datasheet was reformatted to fit IPT Biodiversity.AQ standard. The new datasheet "McInnesMolecularEcology.csv" provides the dataset ID, event ID, recordNumber, resourceID, relatedResourceID, relationshipOfResource, relationshipAccordingTo, locationID, decimalLatitude, decimalLongitude, country, countryCode, eventDate, year, verbatimMonth, behaviour, occurrenceStatus, basisOfRecord, organismQuantity, organismQuantityType, protocol. The taxonomical organisation is provided to the lowest taxonomical rank that could be determined, after matched in WoRMS (World Register of Marine Species).

Описание этапа методики:

  1. Scat samples were PCR amplified with a universal metazoan primer set that is highly conserved and amplifies a region of the nuclear small subunit ribosomal DNA gene (18S rDNA)

Дополнительные метаданные

Альтернативные идентификаторы https://data.aad.gov.au/ipt/resource?r=molecular_ecology